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  5. Len_g15896

Len_g15896 (ATRABA2A, ATRAB11C,...)


Aliases : ATRABA2A, ATRAB11C, ATRAB-A2A, RAB-A2A, RAB11c

Description : A-class RAB GTPase & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g15896

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00135260 AtRABA1f,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
AT2G43130 ATRABA5C, ARA4,... P-loop containing nucleoside triphosphate hydrolases... 0.04 OrthoFinder output from all 47 species
Als_g06168 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41226 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0158.g053866 ATRABA2A,... A-class RAB GTPase & original description: CDS=282-950 0.04 OrthoFinder output from all 47 species
Cre03.g189250 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Dac_g02569 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00471 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02057 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
LOC_Os05g44070.1 ATRABA1B, RAB11,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
MA_18685g0010 AtRABA5d, RABA5d A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g04633 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011299 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=186-836 0.02 OrthoFinder output from all 47 species
Solyc10g045550.2.1 ATRABA2A,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Solyc12g014080.2.1 AtRABA1f,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Tin_g05879 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13810 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026535_P001 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e030680_P001 ATHSGBP, RABA1d,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Zm00001e033825_P001 AtRABA1f,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 18 178
No external refs found!