Aliases : CP31B
Description : not classified & original description: none
Gene families : OG0000715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000715_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00202090 | evm_27.TU.AmTr_v1... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00142700 | ATRBP31, CP31,... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00148p00072380 | evm_27.TU.AmTr_v1... | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00166p00060690 | ATRBP31, CP31,... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G35410 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.06 | OrthoFinder output from all 47 species | |
| AT2G37220 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G52150 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G52380 | PDE322, CP33 | chloroplast RNA-binding protein 33 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G24770 | ATRBP31, CP31,... | 31-kDa RNA binding protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g019289 | ATRBP31, CP31,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g022371 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g39448 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07142 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0159.g053948 | ATRBP31, CP31,... | not classified & original description: CDS=143-1057 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G096500.1 | ATRBP31, CP31,... | not classified & original description: pacid=50595915... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.38G067800.1 | ATRBP31, CP31,... | not classified & original description: pacid=50580282... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00421 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g00942 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g10561 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01007596001 | CP31B | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01022600001 | PDE322, CP33 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01025697001 | No alias | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01027917001 | No alias | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032039001 | No alias | Protein biosynthesis.organelle translation... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032361001 | CP31B | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_28108 | CP31B | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g57010.1 | LOC_Os02g57010 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g25960.1 | LOC_Os03g25960 | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g50110.1 | LOC_Os04g50110 | no hits & (original description: none) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g06450.1 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os08g44290.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os09g39180.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g10051 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434075g0010 | CP31B | component psPSRP2 of small ribosomal subunit proteome | 0.03 | OrthoFinder output from all 47 species | |
| MA_136464g0010 | ATRBP31, CP31,... | 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_474396g0010 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.03 | OrthoFinder output from all 47 species | |
| MA_482994g0010 | CP31B | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| MA_65183g0010 | No alias | component psPSRP2 of small ribosomal subunit proteome | 0.04 | OrthoFinder output from all 47 species | |
| Mp2g13800.1 | No alias | 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g04850 | ATRBP31, CP31,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02906 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g06962 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19962 | CP31B | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19963 | ATRBP31, CP31,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0122.g021464 | CP31B | not classified & original description: CDS=19-840 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g06842 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g10911 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g006940.4.1 | PDE322, CP33,... | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g111840.3.1 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g076840.3.1 | Solyc08g076840 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g05046 | ATRBP31, CP31,... | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e001824_P002 | Zm00001e001824 | RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003947_P001 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e007101_P002 | Zm00001e007101 | 33 kDa ribonucleoprotein, chloroplastic OS=Nicotiana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022086_P002 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e032835_P001 | PDE322, CP33,... | RNA-binding protein CP33, chloroplastic OS=Arabidopsis... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e033465_P001 | ATRBP31, CP31,... | RNA editing factor (CP31) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e033636_P003 | Zm00001e033636 | component psPSRP2 of small ribosomal subunit proteome | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e035630_P001 | Zm00001e035630 | 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0032977 | membrane insertase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| MF | GO:0051920 | peroxiredoxin activity | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140104 | molecular carrier activity | IEP | HCCA |
| MF | GO:0140597 | protein carrier chaperone | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| No external refs found! |
