Len_g16372 (AP2, FLO2, FL1)

Aliases : AP2, FLO2, FL1

Description : AP2-type transcription factor *(WRI/AIL) & original description: none

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g16372
Cluster	HCCA: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
AT4G36920	AP2, FLO2, FL1	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Als_g14197	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Als_g15824	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene20942.t1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g12197	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
LOC_Os03g19900.1	AIL7, LOC_Os03g19900	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os04g55970.2	AIL5, EMK, CHO1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os08g34360.1	LOC_Os08g34360	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Mp7g13270.1	ADAP	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008387	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Solyc03g044300.3.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc04g049800.3.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc09g007260.4.1	RAP2.7, TOE1,...	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0003879	ATP phosphoribosyltransferase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	331	379
IPR001471	AP2/ERF_dom	422	470

External Links

No external refs found!