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  5. Len_g16439

Len_g16439


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16439

Target Alias Description ECC score Gene Family Method Actions
AT2G39650 No alias Protein of unknown function (DUF506) 0.04 OrthoFinder output from all 47 species
Aev_g28669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g31327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0095.g043558 No alias not classified & original description: CDS=525-2087 0.05 OrthoFinder output from all 47 species
Ehy_g05465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020560001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os10g28210.1 LOC_Os10g28210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g40985 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_949779g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g25673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g007580.1.1 Solyc06g007580 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e000474_P001 Zm00001e000474 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e004776_P001 Zm00001e004776 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e005992_P006 Zm00001e005992 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023428_P001 Zm00001e023428 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 124 371
No external refs found!