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  5. Len_g16987

Len_g16987 (EST3, MRP4, ATMRP4, ABCC4)


Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g16987

Target Alias Description ECC score Gene Family Method Actions
Aop_g07552 MRP11, ABCC13, ATMRP11 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g62779 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G061900.1 ABCC1, ATABCC1,... subfamily ABCC transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001254.8 MRP10, ATMRP10, ABCC14 No description available 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020553.190 ATABCC5, MRP5,... ABC transporter C family member 4 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020941.28 AtABCC2, ABCC2,... ABC transporter C family member 14 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g10458 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02029 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26331 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50415 ABCC12, MRP13, ATMRP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10363 ABCC12, MRP13, ATMRP13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021595001 AtABCC2, ABCC2,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Gb_12836 ATMRP14, ABCC10, MRP14 ABC transporter C family member 10 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os04g13220.1 EST3, MRP4,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Len_g22379 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24237 MRP10, ATMRP10, ABCC14 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22300 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37519 ABCC3, ATMRP3, MRP3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04405 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13013 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25890 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27594 ATABCC5, MRP5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001687 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-2715 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001693 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: CDS=1-1395 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004099 ATMRP12, MRP12, ABCC11 subfamily ABCC transporter & original description: CDS=1-3957 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=1-4845 0.03 OrthoFinder output from all 47 species
Sam_g26056 No alias glutathione S-conjugate transporter & original description: none 0.05 OrthoFinder output from all 47 species
Solyc08g006880.3.1 AtABCC2, ABCC2,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species
Solyc12g036130.1.1 ABCC12, MRP13,... ABC transporter C family member 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g036160.3.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g21386 ATABCC5, MRP5,... subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27607 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034300_P001 ABCC3, ATMRP3,... subfamily ABCC transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1295 1443
IPR011527 ABC1_TM_dom 313 582
IPR011527 ABC1_TM_dom 999 1211
IPR003439 ABC_transporter-like_ATP-bd 647 780
No external refs found!