Len_g18025


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18025

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g049688 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16739 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g16959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07904 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g40241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04389 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28679 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03711.t1 Aspi01Gene03711 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09926.t1 CRR22, Aspi01Gene09926 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024983 No alias not classified & original description: CDS=1-3423 0.04 OrthoFinder output from all 47 species
Cba_g04727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g07105 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g31665 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75345 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.09G032600.1 Ceric.09G032600 not classified & original description: pacid=50587514... 0.08 OrthoFinder output from all 47 species
Ceric.10G047400.1 OTP84, Ceric.10G047400 not classified & original description: pacid=50612794... 0.06 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.08 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.06 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.05 OrthoFinder output from all 47 species
Dac_g05578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35587 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38979 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21802 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
Len_g18591 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33765 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g07585 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34228 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46028 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g44738 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14721 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19566 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g38675 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ppi_g07547 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54818 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g02687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 377 424
IPR002885 Pentatricopeptide_repeat 177 223
IPR002885 Pentatricopeptide_repeat 75 121
IPR002885 Pentatricopeptide_repeat 479 526
IPR002885 Pentatricopeptide_repeat 276 323
IPR002885 Pentatricopeptide_repeat 150 171
IPR002885 Pentatricopeptide_repeat 454 475
IPR002885 Pentatricopeptide_repeat 49 72
IPR002885 Pentatricopeptide_repeat 352 374
No external refs found!