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  5. Len_g18161

Len_g18161


Description : not classified & original description: none


Gene families : OG0000168 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000168_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00203890 evm_27.TU.AmTr_v1... Thaumatin-like protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00039030 ATOSM34, OSM34,... Thaumatin-like protein OS=Olea europaea 0.01 OrthoFinder output from all 47 species
AMTR_s00041p00163280 evm_27.TU.AmTr_v1... Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AT1G18250 ATLP-1 Pathogenesis-related thaumatin superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G28790 No alias Pathogenesis-related thaumatin superfamily protein 0.01 OrthoFinder output from all 47 species
AT4G36000 No alias Pathogenesis-related thaumatin superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G40020 No alias Pathogenesis-related thaumatin superfamily protein 0.01 OrthoFinder output from all 47 species
Adi_g048869 ATLP-3, TLP-3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g048870 ATLP-3, TLP-3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02780 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19650.t1 Aspi01Gene19650 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene19651.t1 Aspi01Gene19651 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69180.t1 ATLP-1, Aspi01Gene69180 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010574 No alias not classified & original description: CDS=368-1177 0.02 OrthoFinder output from all 47 species
Azfi_s0026.g023359 No alias not classified & original description: CDS=330-1253 0.02 OrthoFinder output from all 47 species
Cba_g59490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G002400.1 Ceric.01G002400 not classified & original description: pacid=50590500... 0.01 OrthoFinder output from all 47 species
Dcu_g39008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13171 ATOSM34, OSM34 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009930001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01018767001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019849001 ATOSM34, OSM34 Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum 0.03 OrthoFinder output from all 47 species
Gb_07674 ATOSM34, OSM34 no description available(sp|q5dwg2|crj34_cryja : 356.0) 0.03 OrthoFinder output from all 47 species
Gb_07682 ATOSM34, OSM34 no description available(sp|q8h994|crj33_cryja : 358.0) 0.02 OrthoFinder output from all 47 species
Gb_14622 No alias Osmotin-like protein OS=Solanum lycopersicum... 0.05 OrthoFinder output from all 47 species
Gb_25511 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_25722 ATLP-3, TLP-3 no description available(sp|q5dwg1|crj35_cryja : 343.0) 0.01 OrthoFinder output from all 47 species
Gb_39066 No alias no description available(sp|q5dwg1|crj35_cryja : 386.0) 0.01 OrthoFinder output from all 47 species
LOC_Os03g14030.1 LOC_Os03g14030 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os08g43510.1 LOC_Os08g43510 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os11g47944.1 LOC_Os11g47944 Thaumatin-like protein OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_10433458g0020 ATOSM34, OSM34 no description available(sp|q5dwg2|crj34_cryja : 183.0) 0.05 OrthoFinder output from all 47 species
Nbi_g30936 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26091 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g24697 ATOSM34, OSM34 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020530 ATLP-3, TLP-3 not classified & original description: CDS=173-1168 0.01 OrthoFinder output from all 47 species
Smo236128 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Smo410984 No alias Thaumatin-like protein 1a OS=Malus domestica 0.01 OrthoFinder output from all 47 species
Smo419455 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc02g083760.4.1 Solyc02g083760 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g079890.4.1 ATLP-3, TLP-3,... Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc12g056360.1.1 ATOSM34, OSM34,... Thaumatin-like protein OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
Tin_g11926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036000_P001 Zm00001e036000 Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036004_P001 Zm00001e036004 no description available(sp|q9ff29|pr5k_arath : 261.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001938 Thaumatin 1 215
No external refs found!