Len_g18209


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18209

Target Alias Description ECC score Gene Family Method Actions
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g079818 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g082818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02910 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04187 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06659 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07015 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16804 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21153 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23950 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26838 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33573 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68113 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69569 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.04 OrthoFinder output from all 47 species
Ceric.28G070600.1 Ceric.28G070600 not classified & original description: pacid=50569629... 0.04 OrthoFinder output from all 47 species
Ceric.34G057700.1 CRR2, Ceric.34G057700 not classified & original description: pacid=50623387... 0.04 OrthoFinder output from all 47 species
Ceric.37G004200.1 Ceric.37G004200 not classified & original description: pacid=50616137... 0.04 OrthoFinder output from all 47 species
Dac_g19058 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31028 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g44017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033735001 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.04 OrthoFinder output from all 47 species
MA_10434740g0010 OSB1 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g03990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03547 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05398 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06747 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22740 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15736 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18869 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57817 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61309 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018966 No alias not classified & original description: CDS=1-2631 0.04 OrthoFinder output from all 47 species
Smo122934 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Spa_g14696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08346 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17315 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e039026_P001 OTP82, Zm00001e039026 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 46 75
IPR002885 Pentatricopeptide_repeat 183 207
IPR002885 Pentatricopeptide_repeat 107 153
IPR002885 Pentatricopeptide_repeat 208 255
IPR002885 Pentatricopeptide_repeat 310 357
No external refs found!