Len_g18263


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AT1G56690 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G35030 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g002040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034782 LPA66 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101228 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22600 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05916 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06074 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07040 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10753 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19046 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26965 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g39230 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07235.t1 REME1, Aspi01Gene07235 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19500.t1 Aspi01Gene19500 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31317.t1 CRR28, Aspi01Gene31317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34733.t1 Aspi01Gene34733 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38545.t1 Aspi01Gene38545 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000446 No alias not classified & original description: CDS=1-2970 0.04 OrthoFinder output from all 47 species
Azfi_s0004.g008511 No alias not classified & original description: CDS=1-792 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011259 No alias not classified & original description: CDS=1-2301 0.03 OrthoFinder output from all 47 species
Azfi_s0055.g033972 OTP84 not classified & original description: CDS=1-2028 0.04 OrthoFinder output from all 47 species
Azfi_s0081.g038619 No alias not classified & original description: CDS=1-4530 0.04 OrthoFinder output from all 47 species
Azfi_s0095.g043579 CRR22 not classified & original description: CDS=1-3435 0.06 OrthoFinder output from all 47 species
Azfi_s0113.g045915 CRR22 not classified & original description: CDS=197-1879 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065836 No alias not classified & original description: CDS=1-3591 0.04 OrthoFinder output from all 47 species
Cba_g06936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34897 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.03 OrthoFinder output from all 47 species
Ceric.04G002600.1 Ceric.04G002600 not classified & original description: pacid=50631990... 0.03 OrthoFinder output from all 47 species
Ceric.04G072400.1 Ceric.04G072400 not classified & original description: pacid=50630959... 0.03 OrthoFinder output from all 47 species
Ceric.06G000900.1 OTP84, Ceric.06G000900 not classified & original description: pacid=50619446... 0.03 OrthoFinder output from all 47 species
Ceric.07G030200.1 Ceric.07G030200 not classified & original description: pacid=50627452... 0.03 OrthoFinder output from all 47 species
Ceric.11G086200.1 OTP84, Ceric.11G086200 not classified & original description: pacid=50595902... 0.03 OrthoFinder output from all 47 species
Ceric.14G013800.1 Ceric.14G013800 not classified & original description: pacid=50633719... 0.05 OrthoFinder output from all 47 species
Ceric.20G079900.1 CRR22, Ceric.20G079900 not classified & original description: pacid=50567064... 0.03 OrthoFinder output from all 47 species
Ceric.27G070400.1 CRR22, Ceric.27G070400 not classified & original description: pacid=50605716... 0.03 OrthoFinder output from all 47 species
Ceric.34G039200.1 Ceric.34G039200 not classified & original description: pacid=50623691... 0.03 OrthoFinder output from all 47 species
Ceric.38G024200.1 Ceric.38G024200 not classified & original description: pacid=50580039... 0.04 OrthoFinder output from all 47 species
Dac_g04720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27446 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42982 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05563 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g16956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17094 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g51669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18216 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010898001 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
GSVIVT01031733001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
LOC_Os03g62400.1 LOC_Os03g62400 Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
LOC_Os04g38980.1 LOC_Os04g38980 Pentatricopeptide repeat-containing protein At4g39952,... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g02415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03252 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g14930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26486 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54471 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_107723g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
MA_1109g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
MA_124907g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
MA_474261g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
MA_480955g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
MA_86894g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Msp_g27922 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03894 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32640 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60357 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007241 No alias protein S-acyltransferase *(PAT22) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021689 No alias S-adenosyl methionine transporter *(GOSAMT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024290 No alias not classified & original description: CDS=1-2301 0.03 OrthoFinder output from all 47 species
Sam_g02108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo108652 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Tin_g05224 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13752 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29863 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43979 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Zm00001e001038_P001 CRR2, Zm00001e001038 Pentatricopeptide repeat-containing protein At1g08070,... 0.02 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.02 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 185 232
IPR002885 Pentatricopeptide_repeat 390 437
IPR002885 Pentatricopeptide_repeat 491 538
IPR002885 Pentatricopeptide_repeat 287 334
IPR002885 Pentatricopeptide_repeat 83 130
No external refs found!