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  5. Len_g18272

Len_g18272


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18272

Target Alias Description ECC score Gene Family Method Actions
Adi_g005780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17854 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19261 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26861 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39950 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27579 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27600 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37595 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30728 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01906.t1 Aspi01Gene01906 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02505.t1 Aspi01Gene02505 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02798.t1 Aspi01Gene02798 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05366.t1 VAC1, ECB2,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05393.t1 Aspi01Gene05393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10779.t1 CRR22, Aspi01Gene10779 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14090.t1 Aspi01Gene14090 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14586.t1 Aspi01Gene14586 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14821.t1 CRR2, Aspi01Gene14821 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20467.t1 EMB2758, Aspi01Gene20467 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21897.t1 EMB2758, Aspi01Gene21897 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23581.t1 Aspi01Gene23581 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26329.t1 Aspi01Gene26329 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t2 OSB3, Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene28610.t1 REME1, Aspi01Gene28610 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33231.t1 CRR22, Aspi01Gene33231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34516.t1 Aspi01Gene34516 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34548.t1 Aspi01Gene34548 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34713.t1 Aspi01Gene34713 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34727.t1 Aspi01Gene34727 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34740.t1 Aspi01Gene34740 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38545.t1 Aspi01Gene38545 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43278.t1 Aspi01Gene43278 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44213.t1 Aspi01Gene44213 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44451.t1 CRR2, Aspi01Gene44451 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46609.t1 CRR22, Aspi01Gene46609 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50511.t1 Aspi01Gene50511 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54997.t1 CRK8, Aspi01Gene54997 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57016.t1 Aspi01Gene57016 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61363.t1 Aspi01Gene61363 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72317.t1 Aspi01Gene72317 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030697 No alias not classified & original description: CDS=1-2361 0.03 OrthoFinder output from all 47 species
Azfi_s0119.g046740 No alias not classified & original description: CDS=1-2259 0.05 OrthoFinder output from all 47 species
Cba_g05269 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05270 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g29637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g33742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34546 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35114 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g36311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68945 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77402 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.05G086700.1 Ceric.05G086700 not classified & original description: pacid=50579096... 0.04 OrthoFinder output from all 47 species
Ceric.05G093000.1 Ceric.05G093000 not classified & original description: pacid=50577993... 0.03 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.03 OrthoFinder output from all 47 species
Ceric.14G008900.1 Ceric.14G008900 not classified & original description: pacid=50634493... 0.04 OrthoFinder output from all 47 species
Dac_g05578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36894 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16922 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g19456 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04422 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g10840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22592 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22610 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23896 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Len_g04783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18293 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18520 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18522 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g21178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g54495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54934 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06627 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28800 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46028 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44738 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15027 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13279 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19566 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57327 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g21946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26535 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32958 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36326 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45773 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12935 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38609 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13689 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44131 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 225 270
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 429 477
IPR002885 Pentatricopeptide_repeat 123 169
IPR002885 Pentatricopeptide_repeat 331 358
IPR002885 Pentatricopeptide_repeat 301 323
IPR002885 Pentatricopeptide_repeat 496 527
No external refs found!