Aliases : VAC1, ECB2, ATECB2
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00243230 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00065p00031420 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g33680... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24332 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g37181 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19186 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19305 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19312 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g06038 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27009 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g04252 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008781 | No alias | not classified & original description: CDS=1-2346 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009022 | No alias | not classified & original description: CDS=1-2334 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011259 | No alias | not classified & original description: CDS=1-2301 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030882 | CRR22 | not classified & original description: CDS=1-1611 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0065.g035815 | No alias | not classified & original description: CDS=1-2163 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045914 | No alias | not classified & original description: CDS=1-2748 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0194.g057202 | No alias | not classified & original description: CDS=1-2553 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0283.g063072 | No alias | not classified & original description: CDS=1-2475 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0471.g072918 | No alias | not classified & original description: CDS=1-3447 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g18582 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34432 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g24752 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g36039 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06464 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08966 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16678 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g21484 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g35769 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g38524 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g40877 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43330 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g22114 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46522 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010898001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035491001 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g56400.1 | LOC_Os03g56400 | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g35650.1 | LOC_Os04g35650 | Pentatricopeptide repeat-containing protein At3g26540... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os07g39910.1 | LOC_Os07g39910 | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g06490.2 | SLO1, LOC_Os08g06490 | Pentatricopeptide repeat-containing protein At4g22760... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g38610.1 | LOC_Os08g38610 | Pentatricopeptide repeat-containing protein At1g26900,... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18307 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g06850 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| MA_10164206g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429069g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.06 | OrthoFinder output from all 47 species | |
| MA_137736g0010 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| MA_31170g0010 | CRR22 | RNA editing factor (MEF19) | 0.02 | OrthoFinder output from all 47 species | |
| MA_34492g0020 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_72886g0010 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g31404 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g41375 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g06230 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15702 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g40735 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g23541 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g24441 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02586 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g11385 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12874 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g13573 | VAC1, ECB2, ATECB2 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63839 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g15729 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23618 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c6_28980V3.1 | Pp3c6_28980 | organellar single-stranded DNA binding protein 3 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g06959 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g35733 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11237 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13567 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo76175 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc01g081020.1.1 | Solyc01g081020 | RNA editing factor (OTP80) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g066080.1.1 | OTP85, Solyc06g066080 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g09530 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g18869 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23705 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g52415 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e003605_P001 | DOT4, Zm00001e003605 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e007042_P001 | Zm00001e007042 | RNA editing factor (AEF1) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e007597_P001 | Zm00001e007597 | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028330_P001 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004097 | catechol oxidase activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| MF | GO:0008324 | monoatomic cation transmembrane transporter activity | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015075 | monoatomic ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015318 | inorganic molecular entity transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | HCCA |
| MF | GO:0016682 | oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 82 | 104 |
| IPR002885 | Pentatricopeptide_repeat | 110 | 140 |
| IPR002885 | Pentatricopeptide_repeat | 184 | 206 |
| IPR002885 | Pentatricopeptide_repeat | 490 | 512 |
| IPR002885 | Pentatricopeptide_repeat | 517 | 563 |
| IPR002885 | Pentatricopeptide_repeat | 6 | 52 |
| IPR002885 | Pentatricopeptide_repeat | 311 | 359 |
| IPR002885 | Pentatricopeptide_repeat | 210 | 256 |
| IPR002885 | Pentatricopeptide_repeat | 413 | 460 |
| No external refs found! |
