Len_g18445


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g18445

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00244370 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
AMTR_s00439p00011030 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g04780,... 0.03 OrthoFinder output from all 47 species
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035684 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17011 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene49895.t1 CRR22, Aspi01Gene49895 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024917 No alias not classified & original description: CDS=1-3621 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dcu_g38857 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12128 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19916 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025574001 No alias Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
LOC_Os01g51790.1 LOC_Os01g51790 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g04842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18949 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g11306 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g33296 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07605 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009681 No alias not classified & original description: CDS=1-2907 0.02 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo5521 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.03 OrthoFinder output from all 47 species
Zm00001e010182_P001 Zm00001e010182 Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 146 172
IPR002885 Pentatricopeptide_repeat 110 133
No external refs found!