Aliases : APUM12, PUM12
Description : not classified & original description: none
Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dcu_g06465 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13050 | APUM12, PUM12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g09040.1 | APUM12, PUM12 | Pumilio homolog 12 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e039541_P001 | APUM12, PUM12,... | Pumilio homolog 12 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006413 | translational initiation | IEP | HCCA |
| MF | GO:0008131 | primary amine oxidase activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0015074 | DNA integration | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | HCCA |
| MF | GO:0016641 | oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000571 | Znf_CCCH | 132 | 152 |
| IPR001313 | Pumilio_RNA-bd_rpt | 341 | 372 |
| IPR001313 | Pumilio_RNA-bd_rpt | 303 | 334 |
| IPR001313 | Pumilio_RNA-bd_rpt | 487 | 520 |
| IPR001313 | Pumilio_RNA-bd_rpt | 414 | 447 |
| IPR001313 | Pumilio_RNA-bd_rpt | 379 | 409 |
| IPR001313 | Pumilio_RNA-bd_rpt | 452 | 469 |
| IPR001313 | Pumilio_RNA-bd_rpt | 267 | 301 |
| IPR001313 | Pumilio_RNA-bd_rpt | 526 | 547 |
| No external refs found! |
