Aliases : OTP86
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00259690 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46460,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00210570 | EMB2758 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G56690 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G08820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G15720 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G39530 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g009422 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g050950 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g112358 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g42385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g05216 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g05316 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g09099 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16335 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16565 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16587 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16839 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21042 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27661 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g30371 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g32891 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36200 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g05908 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g18769 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27894 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g37552 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16831 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68471 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20751 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G004700.1 | Ceric.14G004700 | not classified & original description: pacid=50634585... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.23G037000.1 | CRR22, Ceric.23G037000 | not classified & original description: pacid=50610097... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G046500.1 | Ceric.39G046500 | not classified & original description: pacid=50582543... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g18246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25009 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25289 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30472 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31750 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35668 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g36003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g42747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g42980 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43221 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08045 | DOT4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08907 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09653 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g37501 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g05762 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08291 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16911 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g21324 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g28526 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g37552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g49997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50255 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g11470.1 | LOC_Os01g11470 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g08680.1 | LOC_Os03g08680 | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g04816 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g09279 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g23563 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04178 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04742 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07069 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08056 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10139 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32911 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10317671g0010 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g17734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24030 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g28020 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34466 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g41405 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g20274 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g21947 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43844 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g36408 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63650 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13105 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39236 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g45382 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g57919 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005702 | No alias | not classified & original description: CDS=46-1077 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g14044 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14049 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g25339 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51324 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g090440.1.1 | LPA66, Solyc09g090440 | Pentatricopeptide repeat-containing protein At5g66520... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g23949 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25320 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30211 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g53131 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g02687 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g43664 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004177 | aminopeptidase activity | IEP | HCCA |
| MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006383 | transcription by RNA polymerase III | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0015267 | channel activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
| MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
| MF | GO:0030145 | manganese ion binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0070006 | metalloaminopeptidase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 378 | 401 |
| IPR002885 | Pentatricopeptide_repeat | 73 | 92 |
| IPR002885 | Pentatricopeptide_repeat | 681 | 705 |
| IPR002885 | Pentatricopeptide_repeat | 200 | 246 |
| IPR002885 | Pentatricopeptide_repeat | 97 | 145 |
| IPR002885 | Pentatricopeptide_repeat | 506 | 553 |
| IPR002885 | Pentatricopeptide_repeat | 608 | 654 |
| IPR002885 | Pentatricopeptide_repeat | 301 | 348 |
| IPR002885 | Pentatricopeptide_repeat | 404 | 450 |
| No external refs found! |
