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  5. Len_g19533

Len_g19533


Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g19533

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00179330 ROC2,... Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Aob_g00883 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06151 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06523.t2 ROC1, Aspi01Gene06523 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G026500.1 CYP5, ATCYP5,... EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g22169 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00667 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00741 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c1_32280V3.1 ROC3, Pp3c1_32280 Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.02 OrthoFinder output from all 47 species
Ppi_g05553 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g00177 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10915 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19009 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 45 206
No external refs found!