Len_g20431


Description : not classified & original description: none


Gene families : OG0004526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004526_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g20431
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Als_g14897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0013.g013321 No alias not classified & original description: CDS=250-1647 0.02 OrthoFinder output from all 47 species
Ceric.1Z205300.1 Ceric.1Z205300 not classified & original description: pacid=50613664... 0.07 OrthoFinder output from all 47 species
Dcu_g07038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g56720.1 LOC_Os04g56720 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc04g081200.3.1 Solyc04g081200 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g13381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041860_P003 Zm00001e041860 Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 243 294
IPR000408 Reg_chr_condens 181 240
IPR000408 Reg_chr_condens 349 394
IPR000408 Reg_chr_condens 72 121
IPR000408 Reg_chr_condens 125 170
No external refs found!