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  5. Len_g21306

Len_g21306


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21306

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00026790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g054132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055603 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28483.t1 Aspi01Gene28483 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33210.t1 Aspi01Gene33210 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0157.g053757 No alias not classified & original description: CDS=268-750 0.05 OrthoFinder output from all 47 species
Dac_g39061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g25137 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g26915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo412437 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g059930.3.1 Solyc01g059930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 11 154
No external refs found!