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  5. Len_g21883

Len_g21883


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g21883

Target Alias Description ECC score Gene Family Method Actions
Adi_g022684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074694 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19006 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012461001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Len_g19878 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12697 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012739 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Spa_g18196 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g10948 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 152 199
IPR002885 Pentatricopeptide_repeat 455 500
IPR002885 Pentatricopeptide_repeat 253 299
IPR002885 Pentatricopeptide_repeat 354 400
IPR002885 Pentatricopeptide_repeat 556 603
IPR002885 Pentatricopeptide_repeat 126 147
IPR002885 Pentatricopeptide_repeat 660 689
IPR002885 Pentatricopeptide_repeat 733 756
IPR002885 Pentatricopeptide_repeat 227 252
IPR002885 Pentatricopeptide_repeat 632 648
No external refs found!