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  5. Len_g22017

Len_g22017


Description : not classified & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22017

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00157p00061490 RHC1A,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT1G18780 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G55530 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G29840 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G13430 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G60080 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G01980 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066616 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Adi_g088306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102739 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Adi_g103586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g03081 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g12129 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene11235.t1 Aspi01Gene11235 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15225.t1 Aspi01Gene15225 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33056.t1 Aspi01Gene33056 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58136.t1 Aspi01Gene58136 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0132.g049293 No alias not classified & original description: CDS=1-1575 0.04 OrthoFinder output from all 47 species
Ceric.06G020800.1 Ceric.06G020800 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.06G020900.1 Ceric.06G020900 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.05 OrthoFinder output from all 47 species
Dcu_g05540 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dde_g08219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26594 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dde_g51480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g01160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03331 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g11152 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g13089 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27311 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_22124 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 OrthoFinder output from all 47 species
Gb_22125 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os06g42700.1 LOC_Os06g42700 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g43740.1 LOC_Os07g43740 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g48692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g10572 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g17140.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g14693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04701 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01325 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g24146 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g36482 ATCRT1 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g16883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc02g088030.1.1 Solyc02g088030 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g007895.1.1 Solyc05g007895 E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc05g018050.1.1 Solyc05g018050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g06543 RHC1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016135_P001 Zm00001e016135 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e038273_P001 Zm00001e038273 E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 300 342
No external refs found!