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  5. Len_g22250

Len_g22250


Description : not classified & original description: none


Gene families : OG0002355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002355_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00104540 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT2G46100 No alias Nuclear transport factor 2 (NTF2) family protein 0.04 OrthoFinder output from all 47 species
Adi_g026365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g026366 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g46814 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g00887 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cba_g13447 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ceric.22G006900.1 Ceric.22G006900 not classified & original description: pacid=50614326... 0.03 OrthoFinder output from all 47 species
Ceric.38G002700.1 Ceric.38G002700 not classified & original description: pacid=50580344... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.74 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre06.g292400 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g11491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50971 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g03295 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01026980001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_06822 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g10495.1 LOC_Os07g10495 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g16375 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
MA_2209381g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_26499g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_909559g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp1g14720.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g17958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002163 No alias not classified & original description: CDS=116-802 0.04 OrthoFinder output from all 47 species
Solyc01g095000.3.1 Solyc01g095000 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g40099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10818 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e007173_P001 Zm00001e007173 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 111 213
No external refs found!