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  5. Len_g22494

Len_g22494 (ATGSR1, GLN1;1,...)


Aliases : ATGSR1, GLN1;1, ATGLN1;1, GSR 1

Description : EC_6.3 ligase forming carbon-nitrogen bond & original description: none


Gene families : OG0000646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22494
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Als_g09560 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Aob_g04960 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.02 OrthoFinder output from all 47 species
Aop_g13429 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Cba_g08502 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Cba_g12544 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Cba_g18994 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.26G044000.1 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.06 OrthoFinder output from all 47 species
Dac_g05010 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Dac_g05074 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Dde_g08605 GLN1;4 EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01008483001 ATGSR1, GLN1;1,... Nutrient uptake.nitrogen assimilation.ammonium... 0.02 OrthoFinder output from all 47 species
GSVIVT01011072001 GS2, ATGSL1, GLN2 Nutrient uptake.nitrogen assimilation.ammonium... 0.03 OrthoFinder output from all 47 species
GSVIVT01017868001 GS2, ATGSL1, GLN2 Nutrient uptake.nitrogen assimilation.ammonium... 0.06 OrthoFinder output from all 47 species
Gb_12976 GLN1;4 Glutamine synthetase cytosolic isozyme OS=Pinus... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56400.1 GS2, ATGSL1,... plastidial glutamine synthetase (GLN2) 0.02 OrthoFinder output from all 47 species
Msp_g09593 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g13405 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g16445 No alias EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species
Spa_g39138 ATGSR1, GLN1;1,... EC_6.3 ligase forming carbon-nitrogen bond & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEA Interproscan
BP GO:0006807 nitrogen compound metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
InterPro domains Description Start Stop
IPR008147 Gln_synt_N 22 97
IPR008146 Gln_synth_cat_dom 124 254
No external refs found!