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  5. Len_g22496

Len_g22496 (TRX P, TRX z)


Aliases : TRX P, TRX z

Description : cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ) & original description: none


Gene families : OG0002657 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002657_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Len_g22496

Target Alias Description ECC score Gene Family Method Actions
AT3G06730 TRX P, TRX z Thioredoxin z 0.02 OrthoFinder output from all 47 species
Adi_g045869 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.04 OrthoFinder output from all 47 species
Aob_g00880 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.02 OrthoFinder output from all 47 species
Aspi01Gene22299.t1 TRX P, TRX z,... cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Cba_g18990 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
Cre02.g142800 TRX P, TRX z RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
Dde_g11040 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.03 OrthoFinder output from all 47 species
LOC_Os08g29110.1 TRX P, TRX z,... Z-type thioredoxin. PAP10/TrxZ cofactor of... 0.02 OrthoFinder output from all 47 species
Pir_g19328 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.05 OrthoFinder output from all 47 species
Spa_g11600 TRX P, TRX z cofactor of plastid-encoded RNA polymerase *(PAP10/TrxZ)... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 113 193
No external refs found!