Len_g22949


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g22949

Target Alias Description ECC score Gene Family Method Actions
AT4G05170 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G21340 B70 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g087038 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g06030 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33477 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G003100.1 Ceric.32G003100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01009761001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
MA_125077g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc01g107490.2.1 Solyc01g107490 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc03g120530.3.1 Solyc03g120530 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e005748_P002 Zm00001e005748 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e010350_P001 Zm00001e010350 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e016395_P001 Zm00001e016395 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e019609_P001 Zm00001e019609 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Zm00001e041137_P002 Zm00001e041137 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!