Len_g23208 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g23208

Target Alias Description ECC score Gene Family Method Actions
Adi_g003717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025728 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g041176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12682 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36528 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15487 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54958 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08755 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28257 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g29706 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68092 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene45256.t1 EMB2758, Aspi01Gene45256 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46609.t1 CRR22, Aspi01Gene46609 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0021.g015651 No alias not classified & original description: CDS=67-2907 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061187 No alias not classified & original description: CDS=1-3441 0.04 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g37663 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05389 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23381 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g31679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g44055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20638 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
GSVIVT01033863001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
Len_g03785 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g04332 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g05381 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18274 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18988 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g26507 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g26549 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g29153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47306 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56738 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_20782g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Msp_g03934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g05803 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22779 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g44897 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49579 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07054 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17876 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57153 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g03540 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g05660 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10336 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19291 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g23114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26742 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29864 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41856 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 639 660
IPR002885 Pentatricopeptide_repeat 261 308
IPR002885 Pentatricopeptide_repeat 160 208
IPR002885 Pentatricopeptide_repeat 463 510
IPR002885 Pentatricopeptide_repeat 565 611
IPR002885 Pentatricopeptide_repeat 363 409
No external refs found!