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  5. Len_g24173

Len_g24173


Description : not classified & original description: none


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24173

Target Alias Description ECC score Gene Family Method Actions
Ala_g02108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05313 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11885 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Aop_g08318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038815 No alias not classified & original description: CDS=1-1185 0.03 OrthoFinder output from all 47 species
Azfi_s0133.g049343 No alias not classified & original description: CDS=1-1476 0.03 OrthoFinder output from all 47 species
Cba_g02671 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G013200.1 Ceric.04G013200 not classified & original description: pacid=50630697... 0.03 OrthoFinder output from all 47 species
Ceric.23G015000.1 Ceric.23G015000 not classified & original description: pacid=50610339... 0.03 OrthoFinder output from all 47 species
Ceric.35G044200.1 Ceric.35G044200 not classified & original description: pacid=50582031... 0.03 OrthoFinder output from all 47 species
Dac_g20465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g54860.1 LOC_Os04g54860 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g28530.1 LOC_Os05g28530 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46570.1 LOC_Os07g46570 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g01807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g04860.1 No alias actin filament-bundling factor (THRUMIN) 0.02 OrthoFinder output from all 47 species
Msp_g01181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020827 No alias not classified & original description: CDS=1-1818 0.03 OrthoFinder output from all 47 species
Spa_g10159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07425 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Tin_g21220 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e001700_P001 Zm00001e001700 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e032843_P001 Zm00001e032843 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002109 Glutaredoxin 361 421
No external refs found!