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  5. Len_g24350

Len_g24350 (LAC11)


Aliases : LAC11

Description : EC_1.10 oxidoreductase acting on diphenol or related substance as donor & original description: none


Gene families : OG0000044 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24350

Target Alias Description ECC score Gene Family Method Actions
AT4G39830 No alias Cupredoxin superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G03260 LAC11 laccase 11 0.02 OrthoFinder output from all 47 species
AT5G05390 LAC12 laccase 12 0.02 OrthoFinder output from all 47 species
AT5G58910 LAC16 laccase 16 0.03 OrthoFinder output from all 47 species
Aev_g35252 LAC3 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aop_g36770 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Aop_g42438 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ehy_g14263 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
GSVIVT01034822001 LAC14 Laccase-14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01034850001 No alias Putative laccase-9 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Gb_06000 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
LOC_Os09g20090.1 LOC_Os09g20090 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.04 OrthoFinder output from all 47 species
LOC_Os09g32952.1 LOC_Os09g32952 Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.03 OrthoFinder output from all 47 species
MA_603008g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.10... 0.02 OrthoFinder output from all 47 species
Nbi_g30832 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.03 OrthoFinder output from all 47 species
Ore_g22182 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g43092 ATLAC17, LAC17 EC_1.10 oxidoreductase acting on diphenol or related... 0.02 OrthoFinder output from all 47 species
Ppi_g61925 LAC11 EC_1.10 oxidoreductase acting on diphenol or related... 0.04 OrthoFinder output from all 47 species
Solyc02g062660.2.1 LAC11, Solyc02g062660 Laccase-11 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g072280.3.1 LAC14, Solyc04g072280 Laccase-14 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g052370.3.1 LAC12, Solyc05g052370 Laccase-12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc06g048860.3.1 LAC5, Solyc06g048860 Laccase-5 OS=Arabidopsis thaliana (sp|q9siy8|lac5_arath... 0.03 OrthoFinder output from all 47 species
Solyc06g076760.2.1 LAC4, IRX12,... lignin laccase 0.03 OrthoFinder output from all 47 species
Solyc06g082240.2.1 LAC3, Solyc06g082240 Laccase-3 OS=Arabidopsis thaliana (sp|q56yt0|lac3_arath... 0.03 OrthoFinder output from all 47 species
Zm00001e015854_P001 LAC14, Zm00001e015854 Putative laccase-9 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e019316_P001 ATLAC17, LAC17,... lignin laccase 0.03 OrthoFinder output from all 47 species
Zm00001e021102_P001 LAC7, Zm00001e021102 Laccase-15 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e023886_P001 LAC14, Zm00001e023886 Putative laccase-9 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e031826_P001 ATLAC17, LAC17,... lignin laccase 0.03 OrthoFinder output from all 47 species
Zm00001e032635_P001 LAC7, Zm00001e032635 Laccase-14 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e039529_P002 LAC7, Zm00001e039529 Laccase-25 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001117 Cu-oxidase_2nd 160 308
IPR011707 Cu-oxidase_N 34 148
IPR011706 Cu-oxidase_C 426 556
No external refs found!