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  5. Len_g24555

Len_g24555 (ATTOC132, TOC132)


Aliases : ATTOC132, TOC132

Description : component *(Toc90/120/132/159) of outer envelope TOC translocation system & original description: none


Gene families : OG0001034 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001034_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g24555
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00209230 PPI2, ATTOC159,... Protein translocation.chloroplast.outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Adi_g004992 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Adi_g056057 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.04 OrthoFinder output from all 47 species
Ala_g12683 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Aob_g07968 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.04 OrthoFinder output from all 47 species
Aob_g27915 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.05 OrthoFinder output from all 47 species
Aop_g68603 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.09 OrthoFinder output from all 47 species
Cba_g44852 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.04 OrthoFinder output from all 47 species
Dac_g21418 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.07 OrthoFinder output from all 47 species
Dac_g32728 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.06 OrthoFinder output from all 47 species
LOC_Os03g61890.2 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.04 OrthoFinder output from all 47 species
Nbi_g34789 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.05 OrthoFinder output from all 47 species
Ore_g08184 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Ore_g40925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07688 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Pir_g32642 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s2879.g028484 ATTOC120, TOC120 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Sam_g29928 No alias component *(Toc90/120/132/159) of outer envelope TOC... 0.04 OrthoFinder output from all 47 species
Spa_g18705 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Spa_g50224 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Tin_g13159 ATTOC132, TOC132 component *(Toc90/120/132/159) of outer envelope TOC... 0.03 OrthoFinder output from all 47 species
Zm00001e006277_P001 PPI2, ATTOC159,... component Toc90|Toc120|Toc132|Toc159 of outer envelope... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006703 G_AIG1 292 425
IPR024283 TOC159_MAD 637 900
No external refs found!