Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Len_g27339 | |
| Cluster | HCCA: Cluster_116 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00235510 | OTP84,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G27110 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g004356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036580 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g036754 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g053207 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g101344 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g18190 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g20047 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13233 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g14569 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g24083 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24427 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27794 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g38080 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05672 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g26414 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g38335 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g11079 | CRR21 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02659 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16640 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g16780 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g17427 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g28486 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68030 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene04185.t1 | Aspi01Gene04185 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30154.t1 | Aspi01Gene30154 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0029.g024142 | No alias | not classified & original description: CDS=203-3646 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048584 | CRR22 | not classified & original description: CDS=1-1611 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0251.g060294 | No alias | not classified & original description: CDS=1-879 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s1334.g101644 | No alias | not classified & original description: CDS=1-3543 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s4317.g118724 | No alias | not classified & original description: CDS=1-465 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g11093 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g17429 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20046 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g20229 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20773 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29874 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67652 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05642 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09743 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25885 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30279 | OTP86 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g33093 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g35972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44606 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36401 | OTP86 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g38523 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g28641 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g50877 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g28570.1 | LOC_Os01g28570 | Pentatricopeptide repeat-containing protein At3g49710... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os02g46980.1 | LOC_Os02g46980 | Pentatricopeptide repeat-containing protein At1g31920... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24823 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06708 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g08720 | EMB2758 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g10692 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32919 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_94165g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g22363 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28692 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03782 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05258 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g05835 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06624 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08298 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08599 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15547 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22452 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g24894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27837 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g38465 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g09916 | CRR2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g13275 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g33905 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44325 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g04362 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11784 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12577 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63646 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63890 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g65840 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g12264 | OSB1 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15168 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15704 | CRR22 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g04331 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g04620 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29583 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g33170 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43666 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g46621 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0096.g019330 | No alias | not classified & original description: CDS=1-2295 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01375 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g01747 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02933 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16066 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16320 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g049810.4.1 | Solyc01g049810 | Pentatricopeptide repeat-containing protein At5g56310... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g081900.4.1 | OTP84, Solyc02g081900 | RNA editing factor (OTP84) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g10323 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g17850 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g25375 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g56533 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g57006 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03506 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06329 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021457_P001 | CRR22, Zm00001e021457 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e022253_P001 | Zm00001e022253 | Pentatricopeptide repeat-containing protein At1g59720,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e029450_P001 | Zm00001e029450 | Pentatricopeptide repeat-containing protein At2g46050,... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
| BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
| BP | GO:0006096 | glycolytic process | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
| BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
| MF | GO:0009055 | electron transfer activity | IEP | HCCA |
| BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
| BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
| BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
