1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g27642

Len_g27642 (LHCB2.2, LHCB2)


Aliases : LHCB2.2, LHCB2

Description : component *(LHCb1/2/3) of LHC-II complex & original description: none


Gene families : OG0000137 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000137_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g27642
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00136650 LHCB1.5, LHB1B2,... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Als_g36936 LHCB3*1, LHCB3 component *(LHCb1/2/3) of LHC-II complex & original... 0.01 OrthoFinder output from all 47 species
Aop_g05674 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Aop_g14415 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.05 OrthoFinder output from all 47 species
Aop_g18116 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.04 OrthoFinder output from all 47 species
Aop_g22172 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene28094.t1 LHCB2.2, LHCB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62745.t1 LHCB1.5, LHB1B2,... component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01028204001 LHCB1.5, LHB1B2 Chlorophyll a-b binding protein 16, chloroplastic... 0.01 OrthoFinder output from all 47 species
Len_g20862 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
MA_9388552g0010 LHCB2.2, LHCB2 Chlorophyll a-b binding protein type 2 member 2... 0.03 OrthoFinder output from all 47 species
Mp7g05530.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g05980.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.02 OrthoFinder output from all 47 species
Mp7g06740.1 LHCB2.3, LHCB2, LHCB2.4 component LHCb1/2/3 of LHC-II complex 0.01 OrthoFinder output from all 47 species
Msp_g07353 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g07354 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Msp_g08156 LHCB1.5, LHB1B2 component *(LHCb1/2/3) of LHC-II complex & original... 0.03 OrthoFinder output from all 47 species
Ore_g32299 LHCB2.3, LHCB2, LHCB2.4 component *(LHCb1/2/3) of LHC-II complex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e020625_P001 LHCB1.5, LHB1B2,... Chlorophyll a-b binding protein 48, chloroplastic OS=Zea... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 65 160
No external refs found!