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  5. Len_g27723

Len_g27723


Description : component *(cS23) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0003343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g27723

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00055110 evm_27.TU.AmTr_v1... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Ala_g09246 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g28969 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aob_g18441 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Azfi_s0052.g031601 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g17074 No alias component *(cS23) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.29G082200.1 Ceric.29G082200 component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Lfl_g39341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g13520.1 No alias component psPSRP3 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Nbi_g11760 No alias component *(cS23) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ore_g05910 No alias component *(cS23) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Pnu_g09092 No alias component *(cS23) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Solyc05g009570.3.1 Solyc05g009570 component psPSRP3 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Spa_g01460 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Tin_g12630 No alias component *(cS23) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR006924 Ribosomal_PSRP3/Ycf65 805 851
No external refs found!