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  5. Len_g27982

Len_g27982 (MYB3R-1, ATMYB3R1,...)


Aliases : MYB3R-1, ATMYB3R1, PC-MYB1, MYB3R1, ATMYB3R-1

Description : R1R2R3-MYB transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g27982
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252990 AtMYB124,... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00109p00061950 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.08 OrthoFinder output from all 47 species
AT2G39880 AtMYB25, MYB25 myb domain protein 25 0.02 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.03 OrthoFinder output from all 47 species
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.02 OrthoFinder output from all 47 species
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.11 OrthoFinder output from all 47 species
Adi_g083870 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g39348 MYB3R-1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03504 BW52, ATMYB52, MYB52 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27236 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ala_g33950 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06167 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g14437 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Als_g14702 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Als_g15763 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g20384 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09729 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12966 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.13 OrthoFinder output from all 47 species
Aspi01Gene32034.t1 AtMYB124,... MYB class-R2R3 transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47785.t1 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0105.g044929 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0145.g051658 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0179.g056258 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0243.g059882 AtMYB117, LOF1, MYB117 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.13G051800.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.23G045000.1 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ceric.33G050100.1 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.39G017100.1 MYB88, AtMYB88,... MYB class-R2R3 transcription factor & original... 0.12 OrthoFinder output from all 47 species
Cre07.g345350 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.01 OrthoFinder output from all 47 species
Dac_g04675 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g12641 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Dcu_g15923 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g02281 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010006001 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01015370001 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01019967001 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01035663001 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.08 OrthoFinder output from all 47 species
LOC_Os01g12860.1 MYB3R-1,... transcription factor (MYB) 0.07 OrthoFinder output from all 47 species
LOC_Os03g13310.1 AtMYB109,... transcription factor (MYB) 0.01 OrthoFinder output from all 47 species
LOC_Os12g13570.1 MYB3R-1,... transcription factor (MYB) 0.07 OrthoFinder output from all 47 species
Lfl_g18053 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
MA_605711g0010 No alias Transcription factor MYB3R-4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_89624g0010 LOF2, MYB105, ATMYB105 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Msp_g20543 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g44400 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g02270 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Nbi_g10936 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Pnu_g08075 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g27096 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08219 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g12915 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015735 MYB3R-1,... R1R2R3-MYB transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0123.g021550 MYB3R-3, AtMYB3R3 R1R2R3-MYB transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026344 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0272.g027032 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc06g076840.3.1 ATMYB119,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Solyc08g080580.4.1 MYB3R-1,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Solyc11g071300.2.1 MYB3R-1,... transcription factor (MYB) 0.07 OrthoFinder output from all 47 species
Spa_g05755 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16126 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Spa_g39449 AtMYB124, MYB124, FLP MYB class-R2R3 transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12262 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.09 OrthoFinder output from all 47 species
Zm00001e013910_P001 MYB77, Zm00001e013910 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e031356_P001 MYB3R-1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 51 97
No external refs found!