Len_g28425 (ABCC1, ATABCC1, MRP1,...)

Aliases : ABCC1, ATABCC1, MRP1, EST1, ATMRP1

Description : subfamily ABCC transporter & original description: none

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g28425

Target	Alias	Description	ECC score	Gene Family Method
AT3G13100	ABCC7, ATMRP7, MRP7	multidrug resistance-associated protein 7	0.03	OrthoFinder output from all 47 species
AT3G60160	MRP9, ABCC9, ATMRP9	multidrug resistance-associated protein 9	0.03	OrthoFinder output from all 47 species
Adi_g009809	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g025543	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g042333	MRP9, ABCC9, ATMRP9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g056548	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g04890	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g29404	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g33144	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g43579	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g05096	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g10913	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g34252	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05735	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07552	MRP11, ABCC13, ATMRP11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g13773	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10012.t1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene25301.t1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene41023.t1	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g08097	MRP10, ATMRP10, ABCC14	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g16239	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g25546	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.10G027600.1	ABCC12, MRP13,...	subfamily ABCC transporter & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.23G061900.1	ABCC1, ATABCC1,...	subfamily ABCC transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g05534	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g12889	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g20548	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g18367	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g20666	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019476001	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
GSVIVT01021589001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01021595001	AtABCC2, ABCC2,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
LOC_Os04g13210.1	MRP10, ATMRP10,...	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
LOC_Os06g06440.1	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
LOC_Os11g05700.1	ATMRP14, ABCC10,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
Len_g04955	EST3, MRP4, ATMRP4, ABCC4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g30274	AtABCC2, ABCC2,...	subfamily ABCC transporter & original description: none	0.05	OrthoFinder output from all 47 species
MA_10261902g0010	EST3, MRP4, ATMRP4, ABCC4	ABC transporter C family member 4 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_10436190g0020	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10436190g0030	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_10436190g0040	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
MA_602830g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_629244g0010	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
MA_635466g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_8298525g0010	ATMRP14, ABCC10, MRP14	ABC transporter C family member 10 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp4g15590.1	ATMRP14, ABCC10, MRP14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp5g02230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Mp5g13230.1	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter	0.03	OrthoFinder output from all 47 species
Msp_g14001	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g14029	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g27248	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g07427	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g23776	MRP9, ABCC9, ATMRP9	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g08952	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g18005	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g11952	AtABCC2, ABCC2,...	glutathione S-conjugate transporter & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13013	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g18811	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g06508	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g08938	No alias	glutathione S-conjugate transporter & original description: none	0.02	OrthoFinder output from all 47 species
Smo267218	ATMRP14, ABCC10, MRP14	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Smo94	ATMRP12, MRP12, ABCC11	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Solyc08g006880.3.1	AtABCC2, ABCC2,...	subfamily ABCC transporter	0.02	OrthoFinder output from all 47 species
Spa_g21386	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g23801	ABCC3, ATMRP3, MRP3	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006720	isoprenoid metabolic process	IEP	HCCA
BP	GO:0006721	terpenoid metabolic process	IEP	HCCA
BP	GO:0008299	isoprenoid biosynthetic process	IEP	HCCA
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
MF	GO:0016744	transketolase or transaldolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1100	1250
IPR003439	ABC_transporter-like_ATP-bd	460	595
IPR011527	ABC1_TM_dom	100	354
IPR011527	ABC1_TM_dom	780	1031

External Links

No external refs found!

Len_g28425 (ABCC1, ATABCC1, MRP1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation