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  5. Len_g28504

Len_g28504


Description : metabolite transporter *(DTX) & original description: none


Gene families : OG0000115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000115_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28504

Target Alias Description ECC score Gene Family Method Actions
AT2G04066 No alias MATE efflux family protein 0.02 OrthoFinder output from all 47 species
AT2G04090 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
Adi_g012567 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087328 No alias metabolite transporter *(DTX) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g27768 No alias metabolite transporter *(DTX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25434 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01004076001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01004078001 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
GSVIVT01020806001 TT12, ATTT12 Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
LOC_Os03g08900.1 LOC_Os03g08900 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Len_g11302 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10431371g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_10431941g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_10434642g0010 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_10434918g0010 No alias metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
MA_10436271g0010 No alias metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_114301g0010 TT12, ATTT12 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
MA_45692g0010 TT12, ATTT12 metabolite transporter (DTX) 0.03 OrthoFinder output from all 47 species
Ore_g29450 No alias metabolite transporter *(DTX) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11471 No alias metabolite transporter *(DTX) & original description: none 0.02 OrthoFinder output from all 47 species
Smo270709 No alias Solute transport.carrier-mediated transport.MOP... 0.03 OrthoFinder output from all 47 species
Solyc02g080490.3.1 Solyc02g080490 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc10g007360.4.1 Solyc10g007360 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Solyc12g005850.2.1 Solyc12g005850 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e005085_P001 Zm00001e005085 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e012499_P001 Zm00001e012499 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species
Zm00001e014159_P001 Zm00001e014159 metabolite transporter (DTX) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 68 227
IPR002528 MATE_fam 289 450
No external refs found!