1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g28943

Len_g28943 (RBCS1A)


Aliases : RBCS1A

Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none


Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28943
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.03 OrthoFinder output from all 47 species
Ala_g09842 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G050600.1 RBCS1A, Ceric.09G050600 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G050700.1 RBCS1A, Ceric.09G050700 small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Ceric.09G050800.1 RBCS1A, Ceric.09G050800 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
Cre02.g120100 RBCS1A Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.01 OrthoFinder output from all 47 species
Cre02.g120150 RBCS1A Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Gb_00380 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
LOC_Os12g17600.1 RBCS1A, LOC_Os12g17600 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species
LOC_Os12g19470.2 RBCS1A, LOC_Os12g19470 small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
MA_47626g0010 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Pp3c13_15980V3.1 RBCS1A, Pp3c13_15980 ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from all 47 species
Pp3c3_14510V3.1 RBCS1A, Pp3c3_14510 ribulose bisphosphate carboxylase small chain 1A 0.02 OrthoFinder output from all 47 species
Pp3c3_20140V3.1 RBCS1A, Pp3c3_20140 ribulose bisphosphate carboxylase small chain 1A 0.01 OrthoFinder output from all 47 species
Ppi_g60704 RBCS1A small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from all 47 species
Smo147927 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from all 47 species
Solyc03g034220.3.1 Solyc03g034220 small subunit of ribulose-1,5-bisphosphat... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 66 173
No external refs found!