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  5. Len_g28966

Len_g28966 (CPN60B, LEN1)


Aliases : CPN60B, LEN1

Description : chaperone *(Hsp60) & original description: none


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g28966
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00260480 evm_27.TU.AmTr_v1... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00080200 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AMTR_s00062p00185880 CH-CPN60A,... External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
AT1G55490 CPN60B, LEN1 chaperonin 60 beta 0.05 OrthoFinder output from all 47 species
Adi_g013893 CH-CPN60A, CPN60A, SLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09249 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g11846 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26318 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08982 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02895 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10927 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000356 No alias chaperone *(Hsp60) & original description: CDS=314-2140 0.03 OrthoFinder output from all 47 species
Azfi_s0029.g024060 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=155-2068 0.09 OrthoFinder output from all 47 species
Cba_g13701 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G036700.1 CH-CPN60A,... chaperone *(Hsp60) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G040000.1 Ceric.21G040000 chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.28 No alias subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001107.20 CH-CPN60A, CPN60A, SLP RuBisCO large subunit-binding protein subunit alpha,... 0.01 OrthoFinder output from all 47 species
Cre04.g231222 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
Cre17.g741450 CPN60B, LEN1 External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Dac_g15356 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03921 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09873 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025490001 No alias External stimuli response.temperature.Hsp... 0.05 OrthoFinder output from all 47 species
Gb_32466 CH-CPN60A, CPN60A, SLP subunit alpha of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02380.2 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.06 OrthoFinder output from all 47 species
LOC_Os12g17910.1 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.05 OrthoFinder output from all 47 species
Lfl_g28437 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g21640.1 No alias subunit beta of Cpn60 chaperonin complex. component... 0.11 OrthoFinder output from all 47 species
Mp5g20470.1 CH-CPN60A, CPN60A, SLP subunit alpha of Cpn60 chaperonin complex. component... 0.16 OrthoFinder output from all 47 species
Msp_g11382 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03062 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g09829 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30013 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06617 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g09116 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c24_12180V3.1 CH-CPN60A,... chaperonin-60alpha 0.01 OrthoFinder output from all 47 species
Pp3c6_20400V3.1 CPN60B, LEN1, Pp3c6_20400 chaperonin 60 beta 0.02 OrthoFinder output from all 47 species
Ppi_g14667 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40159 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56884 CPN60B, LEN1 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001253 CH-CPN60A, CPN60A, SLP regulatory factor SNX2 of Retromer protein recycling... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016064 No alias chaperone *(Hsp60) & original description: CDS=1-1875 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020651 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=93-1937 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0182.g024885 CPN60B, LEN1 chaperone *(Hsp60) & original description: CDS=136-1980 0.04 OrthoFinder output from all 47 species
Sam_g12248 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15739 No alias chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g39492 No alias chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g120850.4.1 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.09 OrthoFinder output from all 47 species
Tin_g03459 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029825_P001 CPN60B, LEN1,... subunit beta of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species
Zm00001e031536_P001 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 87 590
No external refs found!