Len_g28971 (ATWRKY24, WRKY24)

Aliases : ATWRKY24, WRKY24

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g28971

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00110p00091490	ATWRKY57,...	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
AT1G69810	WRKY36, ATWRKY36	WRKY DNA-binding protein 36	0.02	OrthoFinder output from all 47 species
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	OrthoFinder output from all 47 species
Adi_g012796	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g021146	WRKY26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g083283	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g37999	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20798	ATWRKY45, WRKY45	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g20940	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33662	WRKY26	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g42426	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g31865	AtWRKY20, WRKY20	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g60353	WRKY23, ATWRKY23	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17672.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene24680.t1	WRKY43,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47044.t1	WRKY26, Aspi01Gene47044	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52709.t1	Aspi01Gene52709	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52797.t3	Aspi01Gene52797	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene65374.t1	ATWRKY24,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene68493.t1	WRKY28,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0052.g031586	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: CDS=1-864	0.04	OrthoFinder output from all 47 species
Cba_g19526	WRKY6, ATWRKY6	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g38597	WRKY3	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g08284	WRKY26	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g03251	ATWRKY57, WRKY57	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g31501	WRKY42, AtWRKY42	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01028147001	WRKY23, ATWRKY23	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
LOC_Os09g30400.3	WRKY2, ATWRKY2,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os11g29870.1	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Lfl_g09240	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_654670g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g06292	ATWRKY24, WRKY24	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g05882	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g36467	WRKY55, ATWRKY55	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15530	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g63386	ATWRKY71, WRKY71	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023783	WRKY75, ATWRKY75	WRKY-type transcription factor & original description: CDS=1-1536	0.03	OrthoFinder output from all 47 species
Sam_g28344	No alias	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc02g032950.3.1	WRKY6, ATWRKY6,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Solyc02g094270.2.1	WRKY75,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Spa_g22580	WRKY48, ATWRKY48	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37056	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03844	No alias	WRKY-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g31472	No alias	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g46079	WRKY4	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016669_P001	ATWRKY13,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Zm00001e023139_P001	Zm00001e023139	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Zm00001e027804_P001	WRKY9, ATWRKY9,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	301	357

External Links

No external refs found!

Len_g28971 (ATWRKY24, WRKY24)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation