1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g29145

Len_g29145 (ARF1)


Aliases : ARF1

Description : ARF-type transcription factor & original description: none


Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267580 ARF19, IAA22,... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
AMTR_s00148p00046020 ARF16,... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
AT4G23980 ARF9 auxin response factor 9 0.03 OrthoFinder output from all 47 species
Ala_g06732 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07961 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035933 ARF6 not classified & original description: CDS=1-678 0.03 OrthoFinder output from all 47 species
Azfi_s0099.g044147 ARF16 ARF-type transcription factor & original description: CDS=1-2757 0.03 OrthoFinder output from all 47 species
Cba_g07702 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g02836 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23659 HSS, ARF1-BP, ARF2, ORE14 ARF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015035001 ARF19, IAA22, ARF11 RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
MA_85955g0010 ARF19, IAA22, ARF11 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Mp1g12750.1 ARF6 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Pir_g29453 ARF1 ARF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04439 ARF10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g096070.3.1 ARF9, Solyc01g096070 transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Spa_g56619 ARF6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014833_P002 ARF1, Zm00001e014833 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species
Zm00001e021527_P006 HSS, ARF1-BP,... transcription factor (ARF) 0.02 OrthoFinder output from all 47 species
Zm00001e025163_P001 ARF6, Zm00001e025163 transcription factor (ARF) 0.04 OrthoFinder output from all 47 species
Zm00001e030325_P003 ARF6, Zm00001e030325 transcription factor (ARF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 634 728
IPR010525 ARF_dom 318 400
IPR003340 B3_DNA-bd 193 294
No external refs found!