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  5. Len_g29289

Len_g29289 (ATVLN2, VLN2)


Aliases : ATVLN2, VLN2

Description : villin actin-crosslinking factor & original description: none


Gene families : OG0000479 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29289

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00248490 ATVLN2, VLN2,... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
Adi_g012045 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085788 VLN4, ATVLN4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20997 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g40168 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04783 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38086 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0277.g061478 ATVLN3, VLN3 villin actin-crosslinking factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g13878 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g64699 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G056400.1 ATVLN3, VLN3,... villin actin-crosslinking factor & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001366.21 ATVLN2, VLN2 Cytoskeleton.microfilament network.actin... 0.01 OrthoFinder output from all 47 species
Cre12.g524400 VLN4, ATVLN4 No description available 0.02 OrthoFinder output from all 47 species
Dac_g07178 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39503 VLN4, ATVLN4 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04950 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08632 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029237001 VLN4, ATVLN4 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
GSVIVT01033261001 ATVLN2, VLN2 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_31397 ATVLN3, VLN3 villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Gb_40777 ATVLN3, VLN3 villin actin-crosslinking factor 0.05 OrthoFinder output from all 47 species
MA_9118625g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g24640.1 ATVLN3, VLN3 villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Pir_g12233 ATVLN2, VLN2 villin actin-crosslinking factor & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g13066 ATVLN3, VLN3 villin actin-crosslinking factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12531 No alias villin actin-crosslinking factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g021420.3.1 VLN4, ATVLN4,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species
Solyc10g079400.3.1 ATVLN2, VLN2,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e010507_P006 VLN4, ATVLN4,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e028314_P001 ATVLN2, VLN2,... villin actin-crosslinking factor 0.03 OrthoFinder output from all 47 species
Zm00001e031068_P001 VLN1, ATVLN1,... villin actin-crosslinking factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
BP GO:0007010 cytoskeleton organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003128 Villin_headpiece 906 941
IPR007123 Gelsolin-like_dom 29 111
IPR007123 Gelsolin-like_dom 534 602
IPR007123 Gelsolin-like_dom 270 338
IPR007123 Gelsolin-like_dom 413 485
IPR007123 Gelsolin-like_dom 149 217
IPR007123 Gelsolin-like_dom 643 687
No external refs found!