Len_g29447 (ATHB5, ATHB-5, HB5)

Aliases : ATHB5, ATHB-5, HB5

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g29447

Target	Alias	Description	ECC score	Gene Family Method
Aev_g21465	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Als_g05565	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aop_g02837	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene30544.t1	ATHB5, ATHB-5,...	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene31735.t2	ATHB5, ATHB-5,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aspi01Gene32029.t1	ATHB5, ATHB-5,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.03G096000.1	ATHB5, ATHB-5,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ceric.08G017800.1	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dde_g20920	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ehy_g03578	ATHB40, HB40, HB-5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01032491001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.09	OrthoFinder output from all 47 species
Gb_35116	AtHB23, HB23	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Gb_39722	ATHB13	transcription factor (HD-ZIP I/II)	0.07	OrthoFinder output from all 47 species
Len_g06981	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Len_g51073	ATHB3, HB-3, ATHB-3, HAT7	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
MA_441783g0010	AtHB23, HB23	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc07g062790.1.1	ATHB52, HB52,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Tin_g09467	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.06	OrthoFinder output from all 47 species
Zm00001e009770_P001	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	168	214
IPR003106	Leu_zip_homeo	216	255

External Links

No external refs found!

Len_g29447 (ATHB5, ATHB-5, HB5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation