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  5. Len_g29468

Len_g29468


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29468
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT1G51200 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT2G27580 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g011056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g084993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36075 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g45722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G076000.1 Ceric.15G076000 not classified & original description: pacid=50640210... 0.03 OrthoFinder output from all 47 species
Ceric.31G021300.1 Ceric.31G021300 not classified & original description: pacid=50574171... 0.03 OrthoFinder output from all 47 species
Ehy_g16249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025305001 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Gb_00577 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Gb_24628 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os06g41010.1 LOC_Os06g41010 Zinc finger A20 and AN1 domain-containing... 0.05 OrthoFinder output from all 47 species
Lfl_g00472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24579 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g20395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo150464 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Solyc01g086970.4.1 Solyc01g086970 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Solyc12g100060.1.1 Solyc12g100060 Zinc finger A20 and AN1 domain-containing... 0.05 OrthoFinder output from all 47 species
Spa_g04942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 164 201
IPR002653 Znf_A20 25 46
No external refs found!