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  5. Len_g29707

Len_g29707 (HCT)


Aliases : HCT

Description : EC_2.3 acyltransferase & original description: none


Gene families : OG0000246 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000246_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g29707

Target Alias Description ECC score Gene Family Method Actions
AT2G19070 SHT spermidine hydroxycinnamoyl transferase 0.03 OrthoFinder output from all 47 species
AT5G48930 HCT hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl... 0.04 OrthoFinder output from all 47 species
Cba_g16101 HCT EC_2.3 acyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06973 HCT Agmatine coumaroyltransferase-2 OS=Hordeum vulgare... 0.05 OrthoFinder output from all 47 species
LOC_Os02g39850.1 HCT, LOC_Os02g39850 hydroxycinnamoyl-CoA:quinate/shikimate... 0.03 OrthoFinder output from all 47 species
LOC_Os04g56900.1 LOC_Os04g56900 Agmatine coumaroyltransferase-2 OS=Hordeum vulgare... 0.04 OrthoFinder output from all 47 species
LOC_Os09g37200.1 LOC_Os09g37200 Putrescine hydroxycinnamoyltransferase OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp5g03000.1 HCT Shikimate O-hydroxycinnamoyltransferase OS=Nicotiana... 0.04 OrthoFinder output from all 47 species
Ppi_g44113 HCT EC_2.3 acyltransferase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002056 HCT EC_2.3 acyltransferase & original description: CDS=1-1485 0.03 OrthoFinder output from all 47 species
Solyc03g117600.3.1 HCT, Solyc03g117600 hydroxycinnamoyl-CoA:quinate/shikimate... 0.04 OrthoFinder output from all 47 species
Solyc11g066640.1.1 Solyc11g066640 Agmatine coumaroyltransferase-2 OS=Hordeum vulgare... 0.03 OrthoFinder output from all 47 species
Zm00001e000631_P001 Zm00001e000631 Tryptamine benzoyltransferase 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e022497_P002 HCT, Zm00001e022497 Putrescine hydroxycinnamoyltransferase 1 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Zm00001e034181_P001 HCT, Zm00001e034181 Putrescine hydroxycinnamoyltransferase 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!