Len_g30234


Description : not classified & original description: none


Gene families : OG0000006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30234

Target Alias Description ECC score Gene Family Method Actions
Als_g00385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17214.t1 Aspi01Gene17214 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0056.g034160 No alias not classified & original description: CDS=1-612 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036397 No alias not classified & original description: CDS=1-366 0.02 OrthoFinder output from all 47 species
Ceric.04G062400.1 Ceric.04G062400 not classified & original description: pacid=50630452... 0.03 OrthoFinder output from all 47 species
Ceric.31G033600.1 Ceric.31G033600 not classified & original description: pacid=50574842... 0.01 OrthoFinder output from all 47 species
Nbi_g00187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38150 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19798 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33356 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 471 541
IPR000477 RT_dom 7 127
No external refs found!