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  5. Len_g30237

Len_g30237


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00243230 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Adi_g013601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03870 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g10468 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03503 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16519 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33571 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g69999 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05295 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07168 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19562 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08184 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g18210 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g19445 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g29816 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g34234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g39306 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g03043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13017 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo82255 CRR2 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
Smo96499 No alias Pentatricopeptide repeat-containing protein At4g16835,... 0.04 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 21 68
No external refs found!