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  5. Len_g30337

Len_g30337


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g30337

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0236.g059498 No alias not classified & original description: CDS=1-2331 0.05 OrthoFinder output from all 47 species
Ceric.13G057100.1 Ceric.13G057100 not classified & original description: pacid=50635531... 0.03 OrthoFinder output from all 47 species
Dde_g28641 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
LOC_Os08g06490.2 SLO1, LOC_Os08g06490 Pentatricopeptide repeat-containing protein At4g22760... 0.05 OrthoFinder output from all 47 species
MA_127785g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_39595g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_465411g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Msp_g45870 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64685 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006120 No alias ssDNA-binding protein *(OSB) & original description: CDS=52-378 0.05 OrthoFinder output from all 47 species
Sam_g13068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 633 658
IPR002885 Pentatricopeptide_repeat 662 691
IPR002885 Pentatricopeptide_repeat 157 187
IPR002885 Pentatricopeptide_repeat 730 752
IPR032867 DYW_dom 871 962
IPR002885 Pentatricopeptide_repeat 356 402
IPR002885 Pentatricopeptide_repeat 454 501
IPR002885 Pentatricopeptide_repeat 256 299
IPR002885 Pentatricopeptide_repeat 557 604
No external refs found!