1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g31133

Len_g31133


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g31133
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT3G52800 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g011057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085857 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g112620 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08393.t1 Aspi01Gene08393 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04875 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.1Z031800.1 Ceric.1Z031800 not classified & original description: pacid=50577077... 0.02 OrthoFinder output from all 47 species
Ceric.1Z113900.1 Ceric.1Z113900 not classified & original description: pacid=50569311... 0.02 OrthoFinder output from all 47 species
Ceric.1Z133000.1 Ceric.1Z133000 not classified & original description: pacid=50597116... 0.02 OrthoFinder output from all 47 species
Ceric.1Z149800.1 Ceric.1Z149800 not classified & original description: pacid=50576940... 0.02 OrthoFinder output from all 47 species
Dde_g03107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01018497001 No alias Zinc finger A20 and AN1 domain-containing... 0.04 OrthoFinder output from all 47 species
GSVIVT01033341001 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os01g52030.1 LOC_Os01g52030 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33880.1 LOC_Os08g33880 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013704 No alias not classified & original description: CDS=1-681 0.03 OrthoFinder output from all 47 species
Sam_g26628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 122 157
IPR002653 Znf_A20 24 46
No external refs found!