Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none
Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00043520 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G26800 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g066616 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g44017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0125.g048560 | No alias | RING-H2-class BTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Cre10.g422050 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os06g42700.1 | LOC_Os06g42700 | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| MA_9328282g0010 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016135_P001 | Zm00001e016135 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005787 | signal peptidase complex | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006465 | signal peptide processing | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0016485 | protein processing | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0050661 | NADP binding | IEP | HCCA |
| BP | GO:0051604 | protein maturation | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| CC | GO:1905368 | peptidase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 184 | 226 |
| No external refs found! |
