1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g33284

Len_g33284


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g33284

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00182540 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.05 OrthoFinder output from all 47 species
AMTR_s00010p00228270 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
AMTR_s00032p00190360 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
AT2G35030 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G40405 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g005491 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058970 RARE1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g07720 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18165 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g22000 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g24838 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g29329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48664 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g26421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30718 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11079 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12064 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g14363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23810 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27470 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37348 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16410 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g20429 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g23781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g33585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36477 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g68130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene33080.t1 Aspi01Gene33080 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60910.t1 Aspi01Gene60910 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g07008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g11909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15366 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g19725 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20713 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23308 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g24308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g39058 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67060 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g67657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67766 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g75269 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g75809 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23468 CRR22 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dac_g28151 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08424 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g30334 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g47882 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g25197 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13146 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008015001 No alias Pentatricopeptide repeat-containing protein At1g74600,... 0.04 OrthoFinder output from all 47 species
GSVIVT01009866001 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01011887001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
GSVIVT01017209001 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
GSVIVT01021246001 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
GSVIVT01021268001 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.03 OrthoFinder output from all 47 species
GSVIVT01022230001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
GSVIVT01024061001 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.03 OrthoFinder output from all 47 species
GSVIVT01024912001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
GSVIVT01025639001 No alias Pentatricopeptide repeat-containing protein At3g53360,... 0.11 OrthoFinder output from all 47 species
GSVIVT01028747001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01030248001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01032394001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
GSVIVT01032994001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
GSVIVT01033872001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.14 OrthoFinder output from all 47 species
GSVIVT01036169001 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
GSVIVT01036511001 No alias RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
GSVIVT01037562001 PDE247, CLB19 RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
LOC_Os07g10400.1 CRR22, LOC_Os07g10400 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Len_g03400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g05445 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g16975 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18873 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18991 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Len_g24103 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g33524 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g40021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43881 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g45180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56238 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12623 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17576 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17942 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g19405 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g20567 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23124 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g31349 CRR22 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g33669 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g34455 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41095 No alias ssDNA-binding protein *(OSB) & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g41276 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46019 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g24441 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g41304 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38675 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g62205 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g47516 OTP85 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53022 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g57671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59330 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g01820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46652 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g11331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06551 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20839 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26504 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g43745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 431 478
IPR002885 Pentatricopeptide_repeat 738 784
IPR002885 Pentatricopeptide_repeat 228 274
IPR002885 Pentatricopeptide_repeat 125 172
IPR002885 Pentatricopeptide_repeat 837 884
IPR002885 Pentatricopeptide_repeat 636 683
IPR002885 Pentatricopeptide_repeat 533 580
IPR002885 Pentatricopeptide_repeat 329 376
IPR002885 Pentatricopeptide_repeat 26 55
IPR002885 Pentatricopeptide_repeat 610 634
IPR002885 Pentatricopeptide_repeat 98 122
IPR002885 Pentatricopeptide_repeat 202 226
No external refs found!