Len_g33495 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g33495

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AMTR_s00038p00071780 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
AMTR_s00049p00223290 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00056p00185560 VAC1, ECB2, ATECB2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00199190 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.03 OrthoFinder output from all 47 species
AMTR_s02193p00008230 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G53600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49640 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06300 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18741 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36532 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06731 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07955 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27914 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41404 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02588 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02614 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07660 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g10337 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16183 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26834 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene31801.t1 Aspi01Gene31801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34104.t1 OTP84, Aspi01Gene34104 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34702.t1 Aspi01Gene34702 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34780.t1 Aspi01Gene34780 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36242.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60521.t1 Aspi01Gene60521 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64841.t1 Aspi01Gene64841 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007695 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012490 No alias not classified & original description: CDS=1-2382 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025187 OTP84 not classified & original description: CDS=1-2199 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g034904 No alias not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035587 No alias not classified & original description: CDS=1-2688 0.03 OrthoFinder output from all 47 species
Azfi_s0065.g035815 No alias not classified & original description: CDS=1-2163 0.03 OrthoFinder output from all 47 species
Azfi_s0104.g044765 No alias not classified & original description: CDS=1-2373 0.03 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.03 OrthoFinder output from all 47 species
Azfi_s0158.g053860 CRR2 not classified & original description: CDS=1-978 0.05 OrthoFinder output from all 47 species
Azfi_s0303.g063761 No alias not classified & original description: CDS=81-2876 0.03 OrthoFinder output from all 47 species
Azfi_s0380.g067373 No alias not classified & original description: CDS=1-3669 0.04 OrthoFinder output from all 47 species
Cba_g03378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75132 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G068200.1 OTP86, Ceric.04G068200 not classified & original description: pacid=50632337... 0.03 OrthoFinder output from all 47 species
Ceric.10G029900.1 Ceric.10G029900 not classified & original description: pacid=50612941... 0.04 OrthoFinder output from all 47 species
Ceric.15G074900.1 Ceric.15G074900 not classified & original description: pacid=50640124... 0.04 OrthoFinder output from all 47 species
Ceric.18G024700.1 Ceric.18G024700 not classified & original description: pacid=50621916... 0.03 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.03 OrthoFinder output from all 47 species
Ceric.26G015700.1 Ceric.26G015700 not classified & original description: pacid=50599561... 0.03 OrthoFinder output from all 47 species
Ceric.27G013400.1 Ceric.27G013400 not classified & original description: pacid=50605328... 0.03 OrthoFinder output from all 47 species
Ceric.28G051100.1 Ceric.28G051100 not classified & original description: pacid=50570532... 0.04 OrthoFinder output from all 47 species
Ceric.35G063700.1 Ceric.35G063700 not classified & original description: pacid=50581590... 0.03 OrthoFinder output from all 47 species
Ceric.36G060000.1 Ceric.36G060000 not classified & original description: pacid=50568455... 0.03 OrthoFinder output from all 47 species
Ceric.39G043600.1 Ceric.39G043600 not classified & original description: pacid=50582616... 0.03 OrthoFinder output from all 47 species
Dac_g15088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26858 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03951 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05900 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05938 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22814 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47657 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000244001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01000968001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01015233001 EMB2261 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
GSVIVT01036788001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
GSVIVT01036975001 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
GSVIVT01037377001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g01115.1 LOC_Os01g01115 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os01g08120.1 OTP81, LOC_Os01g08120 RNA editing factor (OTP81) 0.03 OrthoFinder output from all 47 species
LOC_Os02g07050.1 LOC_Os02g07050 Pentatricopeptide repeat-containing protein At4g20770... 0.02 OrthoFinder output from all 47 species
LOC_Os03g59264.1 LOC_Os03g59264 lectin chaperone (CRT) 0.02 OrthoFinder output from all 47 species
LOC_Os04g33840.1 LOC_Os04g33840 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os04g35650.1 LOC_Os04g35650 Pentatricopeptide repeat-containing protein At3g26540... 0.02 OrthoFinder output from all 47 species
LOC_Os04g39410.1 OTP86, LOC_Os04g39410 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species
LOC_Os04g41120.1 LOC_Os04g41120 Pentatricopeptide repeat-containing protein At4g38010... 0.02 OrthoFinder output from all 47 species
LOC_Os05g49740.1 EMB2744, LOC_Os05g49740 Pentatricopeptide repeat-containing protein At5g39680... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g04787 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431227g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_138676g0010 EMB2261 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
MA_17949g0010 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_24849g0010 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_2991g0010 No alias RNA editing factor (MEF12) 0.03 OrthoFinder output from all 47 species
MA_30949g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_31170g0010 CRR22 RNA editing factor (MEF19) 0.02 OrthoFinder output from all 47 species
MA_681272g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.04 OrthoFinder output from all 47 species
MA_9526611g0020 CRR22 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Msp_g05630 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10472 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32352 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38645 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18691 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g32143 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002726 No alias not classified & original description: CDS=1-1413 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004070 CRR22 not classified & original description: CDS=1-2127 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011780 No alias not classified & original description: CDS=1-2490 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0054.g014208 No alias not classified & original description: CDS=1-2511 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021374 No alias not classified & original description: CDS=1-1881 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0275.g027065 No alias not classified & original description: CDS=1-2244 0.03 OrthoFinder output from all 47 species
Sam_g19790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species
Smo47998 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.02 OrthoFinder output from all 47 species
Solyc07g005170.3.1 Solyc07g005170 Pentatricopeptide repeat-containing protein At1g09410,... 0.02 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.04 OrthoFinder output from all 47 species
Spa_g15227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16630 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08535 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e028330_P001 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
Zm00001e040920_P001 Zm00001e040920 Pentatricopeptide repeat-containing protein At3g26540... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 325
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 328 374
No external refs found!