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  5. Len_g36310

Len_g36310 (ATHB5, ATHB-5, HB5)


Aliases : ATHB5, ATHB-5, HB5

Description : HD-ZIP I/II-type transcription factor & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g36310
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Adi_g104185 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.4 HAT14 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Gb_20878 ATHB3, HB-3, ATHB-3, HAT7 transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
LOC_Os09g21180.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Len_g12116 ATHB53, HB53, HB-8 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_128g0010 ATHB13 transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
MA_19453g0040 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.02 OrthoFinder output from all 47 species
Msp_g05256 HB51, ATHB51, LMI1 HD-ZIP I/II-type transcription factor & original... 0.01 OrthoFinder output from all 47 species
Ppi_g54343 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g01589 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 80 121
IPR001356 Homeobox_dom 32 78
No external refs found!