Len_g37787


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g37787
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00252600 MEF1 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Adi_g080720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g17617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g35868 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g03401 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.01 OrthoFinder output from all 47 species
Ceric.18G049100.1 Ceric.18G049100 not classified & original description: pacid=50621467... 0.01 OrthoFinder output from all 47 species
Dac_g05085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18571 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g39198 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g44991 LOI1, MEF11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g11730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42846 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g45840.1 LOC_Os01g45840 Pentatricopeptide repeat-containing protein At2g36730... 0.02 OrthoFinder output from all 47 species
LOC_Os06g39650.1 LOC_Os06g39650 Pentatricopeptide repeat-containing protein At1g31430... 0.03 OrthoFinder output from all 47 species
Len_g04814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22097 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g02375 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07093 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11799 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57540 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63850 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23561 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07527 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16643 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g57859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo111982 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.01 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g16117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g06631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08462 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g17781 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g19943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 102 158
IPR002885 Pentatricopeptide_repeat 176 222
IPR002885 Pentatricopeptide_repeat 49 75
No external refs found!